Yes. She helped him when she thought he was in the wrong, and when it became clear that he had a special dispensation, that was when she REALLY started getting down on him. From the very first words after it becomes clear what his importance is at Falme, when despite feeling the ta'veren pull as well as noting Min's obvious connection, she's trying to warn Min (a person the Pattern thinks he needs) away from him. When he's a mere soon-to-be crazy channeler, she's cool with letting him run loose and hiding him from people who might have saved his life and more importantly (both objectively and probably in his own eyes) kept him from hurting anyone else. Once it becomes clear that he is so much more important than she, she starts bad-mouthing him and he get's no more help from her.

And Bashere watched him all but snap right before his eyes, but as he points out to Rand, crazy or not, he's still the indispensable figure. In the same book where the uncle & heir to a powerful monarch and one of the five greatest generals alive tells Rand "The world must follow you or fail," Egwene is saying that she will not lead Aes Sedai to follow "him or any man." And calls the idea of swearing fealty to him "...ridiculous, of course..." And this was a mere book after she observed Moiraine, killer of two Forsaken, and rightfully the greatest hero in the history of the White Tower, bar none (Nynaeve was still warming up) give that exact same oath! Who is Egwene, who is Sheriam or Romanda or Lelaine, to refuse what Moiraine Damodred could humble herself to do?