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Re: Actually Praziquantel Send a noteboard - 06/08/2011 11:38:52 PM
Animals with traits that are beneficial to the environment can live longer and potentially contribute more to the gene pool.

The latter is all that matters (biological fitness, or how many viable offspring are produced) in natural selection. Lifespan and any greater purpose (benefit to the environment) are not applicable.

As I see your revision it seems you are more careful in describing NS, but does your view on NS escape being a tautology?

Since contributing to the gene pool is the only definition you give, it either has no result (the author calls that a 'lame' definition, since it isolates the proces of NS so that it no longer tries to explain evolution), or the result is a difference in the gene pool (that is: a difference in the frequencies of genes) after one or several generations, and then we have a tautology again.

'Contributing to the gene pool' is a very vague phrase to use. I clarified what I meant to make the definition more specific. Under natural selection the 'purpose' (if you will) of living is to reproduce as much as you can and leave behind as many offspring as possible. Now, you can get into genetic theories and rationalize that, every offspring will have slightly different genomes due to genetic recombination and spontaneous mutations, which can have good, bad, or neutral consequences in terms of future biological fitness (the ability to produce offspring). But it seems reasonable to me that given a diverse gene pool (which is facilitated by increased biological fitness), the population as a whole would be more likely to survive some calamity or other.

I don't understand where the tautology is in that.

I agree it is a difficult issue to get your head around, especially since there are so many different terms, words and definitions involved.

You just introduced a new one (that is: new to this discussion): 'biological fitness'. Now you define it as the ability to produce offspring.

Then you go on to say that a diverse gene pool is facilitated by increased biological fitness.

So, if a population has an increased number of offspring each generation, there is a larger gene pool and a larger population is more likely to survive a calamity.

Larger, but also more diverse, genetically.
But I'm having trouble picturing this. On the one hand you describe mechanisms that increase diversity in the gene pool (recombination and mutation, of which officially only the second does increase the diversity, since the gene pool is not only what is actually there, but also what is potentially there, but that aside). Next you say that these traits and combinations have good, bad or neutral consequences for (future) biological fitness.

Hmm? How does recombination not increase genetic diversity?
So far so good, but here you seem to skip a step, for when it comes to NS, doesn't that select certain traits to live and others to die out? If not, it's not really selecting. So on the one hand mutation (and if you insist: recombination) may increase variation in the gene pool, doesn't NS decrease variation, leaving only the ones that give the most biological fitness (or eliminating those with the least biological fitness)?

NS does not actively select for or against anything in particular. What happens is that those who are more biologically fit end up contributing relatively more (quantity and diversity) to the gene pool. What happens after that may or may not be 'survival of the fittest', which is a very loaded terminology.

I've used the word fit, in this context, to mean biological fitness, but survival of the fittest generally means the 'hardiest' or 'most resilient', etc. But in nature, biological fitness and 'hardiness' are not usually linked. For example, in bacteria, the presence of antibiotic resistance genes ('hardiness' ) is usually associated with lower biological fitness. Clostridium difficile colitis is a frequent enough example of this. C. difficile is an organism that lives in the digestive tract of normal-asymptomatic people, but it has relatively low biological fitness. It does not reproduce as quickly as other flora of the digestive tract. However, when a broad spectrum antibiotic is administered to the individual, the bacteria without antibiotic resistance die, leaving the C. difficile to flourish in their place. Stopping the administration of broad spectrum antibiotics generally leads to repopulation with the normal intestinal flora over time. That is an example of natural selection. It does not necessarily select for any particular characteristic.
This confuses me, since your next statement is: "given a diverse gene pool (which is facilitated by increased biological fitness)"

while I thought that biological fitness was limiting the diversity of the gene pool. At least at first sight.

It does cause certain traits to be overrepresented in the gene pool, but there will still be new genotypes produced as a result of mutation and recombinations. These may not be the most 'biologically fit' as in the case of the antibiotic resistance gene.
And there still is the possibility of a tautology when NS is defined as "those with a higher biological fitness have a higher probability to contribute to the gene pool". Because giving a greater contribution in the gene pool is the definition of having a higher biological fitness. NS then describes an observation, while it pretends to explain one.

Well, first of all a small nitpick, but there is no probability involved. Fitness is defined by the number of offspring produced (not potential offspring, but number actually produced). So having greater fitness means you've already contributed relatively more to the gene pool.
Second, yes those who have higher biological fitness contribute more to the gene pool. On the other hand, the reverse is not necessarily true. In the case of an adverse event, like an antibiotic, those who subsequently contribute more to the gene pool are not necessarily those who were the most biologically fit prior to that event. These types of events tend to be random over time, and natural selection does not 'plan' or 'guide' which traits should be expressed beforehand.
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